Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 AC092865.7-201ENST00000641832 219 ntBASIC19.72■□□□□ 0.75
RNF139Q8WU17 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF139Q8WU17 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF139Q8WU17 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 KRT18P57-201ENST00000443599 1254 ntBASIC19.71■□□□□ 0.75
RNF139Q8WU17 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF139Q8WU17 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF139Q8WU17 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF139Q8WU17 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF139Q8WU17 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 TMPOP1-202ENST00000424642 1267 ntBASIC19.69■□□□□ 0.74
RNF139Q8WU17 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 RN7SL850P-201ENST00000579959 291 ntBASIC19.69■□□□□ 0.74
RNF139Q8WU17 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF139Q8WU17 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF139Q8WU17 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.68■□□□□ 0.74
RNF139Q8WU17 TNXA-203ENST00000507684 2038 ntBASIC19.68■□□□□ 0.74
RNF139Q8WU17 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF139Q8WU17 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF139Q8WU17 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms