Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.17■■□□□ 1.3
SSH3Q8TE77 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SSH3Q8TE77 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 LIN28AP1-201ENST00000429574 405 ntBASIC23.16■■□□□ 1.3
SSH3Q8TE77 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 AL138781.2-201ENST00000617896 1843 ntBASIC23.16■■□□□ 1.3
SSH3Q8TE77 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SSH3Q8TE77 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SSH3Q8TE77 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 RN7SL850P-201ENST00000579959 291 ntBASIC23.15■■□□□ 1.3
SSH3Q8TE77 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 AC006011.2-201ENST00000621313 1158 ntBASIC23.15■■□□□ 1.3
SSH3Q8TE77 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 KRT8P7-201ENST00000533003 1432 ntBASIC23.15■■□□□ 1.3
SSH3Q8TE77 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SSH3Q8TE77 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.15■■□□□ 1.3
SSH3Q8TE77 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSH3Q8TE77 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSH3Q8TE77 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SSH3Q8TE77 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SSH3Q8TE77 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 BX664615.1-201ENST00000443558 458 ntBASIC23.14■■□□□ 1.29
SSH3Q8TE77 ATP5G1P1-201ENST00000448724 379 ntBASIC23.14■■□□□ 1.29
SSH3Q8TE77 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.14■■□□□ 1.29
SSH3Q8TE77 KRT8P50-201ENST00000562022 1438 ntBASIC23.14■■□□□ 1.29
SSH3Q8TE77 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SSH3Q8TE77 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms