Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAF3IP1Q8TDR0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 PRORSD1P-201ENST00000295112 541 ntBASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAF3IP1Q8TDR0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAF3IP1Q8TDR0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 AL158047.1-201ENST00000445918 881 ntBASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
TRAF3IP1Q8TDR0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 FAM207BP-201ENST00000447172 505 ntBASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
TRAF3IP1Q8TDR0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 FAM197Y1-201ENST00000421178 764 ntBASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.56■□□□□ 0.72
TRAF3IP1Q8TDR0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms