Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00308Q8TCZ7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00308Q8TCZ7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 MIR939-201ENST00000401314 82 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 PBX2P1-201ENST00000493219 1291 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AF213884.3-201ENST00000563833 479 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AC100791.3-201ENST00000617619 330 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AC135776.1-201ENST00000319817 2481 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AL645608.8-201ENST00000606034 2086 ntBASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.52□□□□□ -0.41
LINC00308Q8TCZ7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 AC138028.4-201ENST00000564984 1845 ntBASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 AL162412.1-201ENST00000567129 965 ntBASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00308Q8TCZ7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms