Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CCER1Q8TC90 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 Z85996.1-201ENST00000494644 937 ntBASIC28.05■■■□□ 2.08
CCER1Q8TC90 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 HEIH-201ENST00000623091 1652 ntBASIC28.05■■■□□ 2.08
CCER1Q8TC90 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CCER1Q8TC90 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC28.05■■■□□ 2.08
CCER1Q8TC90 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CCER1Q8TC90 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CCER1Q8TC90 AC073592.3-201ENST00000625118 1834 ntBASIC28.04■■■□□ 2.08
CCER1Q8TC90 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC28.04■■■□□ 2.08
CCER1Q8TC90 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 KRASP1-201ENST00000407852 552 ntBASIC28.03■■■□□ 2.08
CCER1Q8TC90 AC026366.1-201ENST00000488803 879 ntBASIC28.03■■■□□ 2.08
CCER1Q8TC90 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CCER1Q8TC90 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC28.03■■■□□ 2.08
CCER1Q8TC90 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
CCER1Q8TC90 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CCER1Q8TC90 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
CCER1Q8TC90 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 PCDHB18P-201ENST00000524813 2368 ntBASIC28.01■■■□□ 2.07
CCER1Q8TC90 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CCER1Q8TC90 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC28.01■■■□□ 2.07
CCER1Q8TC90 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms