Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 SOX15-203ENST00000570788 1093 ntBASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
DNAAF1Q8NEP3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 AC098934.4-201ENST00000564127 592 ntBASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 HTR7P1-202ENST00000624664 4411 ntBASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
DNAAF1Q8NEP3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
DNAAF1Q8NEP3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms