Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RETREG2Q8NC44 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.27■□□□□ 0.99
RETREG2Q8NC44 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RETREG2Q8NC44 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RETREG2Q8NC44 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 AP003041.3-201ENST00000527151 707 ntBASIC21.26■□□□□ 0.99
RETREG2Q8NC44 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 AL121894.2-201ENST00000602977 491 ntBASIC21.26■□□□□ 0.99
RETREG2Q8NC44 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RETREG2Q8NC44 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RETREG2Q8NC44 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AP000523.1-201ENST00000398242 1049 ntBASIC21.24■□□□□ 0.99
RETREG2Q8NC44 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 TPM4P1-201ENST00000436100 807 ntBASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
RETREG2Q8NC44 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 KRT8P11-201ENST00000409686 1436 ntBASIC21.23■□□□□ 0.99
RETREG2Q8NC44 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 AC008622.2-201ENST00000617006 1229 ntBASIC21.23■□□□□ 0.99
RETREG2Q8NC44 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.23■□□□□ 0.99
RETREG2Q8NC44 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RETREG2Q8NC44 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms