Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHTF2Q8N3S3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 PCED1CP-201ENST00000419887 785 ntBASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 GCSHP2-201ENST00000560971 527 ntBASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 HYMAI.1-201ENST00000620949 238 ntBASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 CR769767.2-201ENST00000622735 460 ntBASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 Z82202.1-201ENST00000623446 1880 ntBASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PHTF2Q8N3S3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 AP000523.1-201ENST00000398242 1049 ntBASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHTF2Q8N3S3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PHTF2Q8N3S3 NEFHP1-201ENST00000412845 2629 ntBASIC19.39■□□□□ 0.7
PHTF2Q8N3S3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHTF2Q8N3S3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHTF2Q8N3S3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHTF2Q8N3S3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PHTF2Q8N3S3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHTF2Q8N3S3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms