Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 AC020763.4-201ENST00000623414 4170 ntBASIC20.89■□□□□ 0.93
DHX40Q8IX18 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DHX40Q8IX18 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.89■□□□□ 0.93
DHX40Q8IX18 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.88■□□□□ 0.93
DHX40Q8IX18 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DHX40Q8IX18 FZD10-202ENST00000539839 3282 ntBASIC20.88■□□□□ 0.93
DHX40Q8IX18 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 POU5F1P3-201ENST00000428824 1078 ntBASIC20.87■□□□□ 0.93
DHX40Q8IX18 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 AC093677.2-201ENST00000600169 1863 ntBASIC20.87■□□□□ 0.93
DHX40Q8IX18 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.87■□□□□ 0.93
DHX40Q8IX18 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DHX40Q8IX18 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DHX40Q8IX18 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 LINC00896-202ENST00000609602 2128 ntBASIC20.86■□□□□ 0.93
DHX40Q8IX18 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 KRT8P32-201ENST00000512863 1461 ntBASIC20.86■□□□□ 0.93
DHX40Q8IX18 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.86■□□□□ 0.93
DHX40Q8IX18 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DHX40Q8IX18 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DHX40Q8IX18 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DHX40Q8IX18 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms