Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
COPS6Q7L5N1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 HCG4P8-203ENST00000443049 980 ntBASIC23.71■■□□□ 1.39
COPS6Q7L5N1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 AL136038.4-201ENST00000603606 1261 ntBASIC23.71■■□□□ 1.39
COPS6Q7L5N1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COPS6Q7L5N1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
COPS6Q7L5N1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COPS6Q7L5N1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.7■■□□□ 1.39
COPS6Q7L5N1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 AC011498.5-201ENST00000592027 486 ntBASIC23.7■■□□□ 1.38
COPS6Q7L5N1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 AC034236.2-201ENST00000606662 1610 ntBASIC23.7■■□□□ 1.38
COPS6Q7L5N1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COPS6Q7L5N1 AL162741.1-201ENST00000565563 1558 ntBASIC23.69■■□□□ 1.38
COPS6Q7L5N1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 ATP5G2P1-201ENST00000433580 426 ntBASIC23.69■■□□□ 1.38
COPS6Q7L5N1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COPS6Q7L5N1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 MIR662-201ENST00000384847 95 ntBASIC23.68■■□□□ 1.38
COPS6Q7L5N1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 KRT18P48-201ENST00000434763 852 ntBASIC23.68■■□□□ 1.38
COPS6Q7L5N1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 NPAP1P7-201ENST00000613027 823 ntBASIC23.68■■□□□ 1.38
COPS6Q7L5N1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COPS6Q7L5N1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 AL049812.1-201ENST00000432563 2267 ntBASIC23.67■■□□□ 1.38
COPS6Q7L5N1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 AL161938.1-201ENST00000569833 2180 ntBASIC23.67■■□□□ 1.38
COPS6Q7L5N1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.67■■□□□ 1.38
COPS6Q7L5N1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms