Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 AC069152.1-201ENST00000438030 544 ntBASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTCHD4Q6ZW05 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 AC104771.1-201ENST00000603335 964 ntBASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCHD4Q6ZW05 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AC142086.2-201ENST00000569753 217 ntBASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AC008687.6-201ENST00000596318 630 ntBASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AC133041.1-202ENST00000642053 222 ntBASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 AC020916.1-201ENST00000587762 1774 ntBASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCHD4Q6ZW05 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCHD4Q6ZW05 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms