Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF549Q6P9A3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF549Q6P9A3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF549Q6P9A3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ZNF549Q6P9A3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF549Q6P9A3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.64■□□□□ 0.58
ZNF549Q6P9A3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 REXO1L12P-201ENST00000622156 912 ntBASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 AL499627.1-201ENST00000569373 2188 ntBASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF549Q6P9A3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 AC090164.3-201ENST00000610780 2143 ntBASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 TMEM191A-211ENST00000637163 1067 ntBASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 AC096733.2-201ENST00000609937 1394 ntBASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNF549Q6P9A3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF549Q6P9A3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms