Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP4R3AQ6IN85 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 HMGA1P5-201ENST00000412453 271 ntBASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 LINC01023-201ENST00000606054 436 ntBASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.33■■□□□ 1.01
PPP4R3AQ6IN85 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PPP4R3AQ6IN85 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.32■■□□□ 1
PPP4R3AQ6IN85 AC098818.2-201ENST00000564925 2320 ntBASIC21.32■■□□□ 1
PPP4R3AQ6IN85 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 MCCD1P1-208ENST00000445732 328 ntBASIC21.31■■□□□ 1
PPP4R3AQ6IN85 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.31■■□□□ 1
PPP4R3AQ6IN85 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 AC093525.10-201ENST00000625130 1569 ntBASIC21.3■■□□□ 1
PPP4R3AQ6IN85 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PPP4R3AQ6IN85 MTMR9LP-203ENST00000426597 1545 ntBASIC21.29■■□□□ 1
PPP4R3AQ6IN85 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms