Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 AC092338.2-201ENST00000568827 1415 ntBASIC19.69■□□□□ 0.74
RNF43Q68DV7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 INGX-201ENST00000359239 846 ntBASIC19.69■□□□□ 0.74
RNF43Q68DV7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 TPM4P1-201ENST00000436100 807 ntBASIC19.69■□□□□ 0.74
RNF43Q68DV7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 AC006011.2-201ENST00000621313 1158 ntBASIC19.69■□□□□ 0.74
RNF43Q68DV7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RNF43Q68DV7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF43Q68DV7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF43Q68DV7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF43Q68DV7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 CROCCP3-202ENST00000420820 1947 ntBASIC19.67■□□□□ 0.74
RNF43Q68DV7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 LINC01238-205ENST00000567549 1107 ntBASIC19.67■□□□□ 0.74
RNF43Q68DV7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF43Q68DV7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF43Q68DV7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.67■□□□□ 0.74
RNF43Q68DV7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
RNF43Q68DV7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF43Q68DV7 AL121894.2-201ENST00000602977 491 ntBASIC19.66■□□□□ 0.74
RNF43Q68DV7 AC010653.2-201ENST00000623505 997 ntBASIC19.66■□□□□ 0.74
RNF43Q68DV7 AL358472.4-201ENST00000633140 710 ntBASIC19.66■□□□□ 0.74
RNF43Q68DV7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms