Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TSPY23P-201ENST00000440136 739 ntBASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 AL121829.2-201ENST00000620908 328 ntBASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 ESPNP-201ENST00000270691 2015 ntBASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC00242Q5T6M2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 AL050303.2-201ENST00000619798 666 ntBASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
LINC00242Q5T6M2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 MIPEPP3-201ENST00000412105 444 ntBASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 AC092368.3-202ENST00000574180 1591 ntBASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms