Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 GPR53P-205ENST00000457298 1084 ntBASIC10.25□□□□□ -0.77
UBR4Q5T4S7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 COX5BP8-201ENST00000416911 349 ntBASIC10.25□□□□□ -0.77
UBR4Q5T4S7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 PAN3-AS1-201ENST00000563843 1351 ntBASIC10.25□□□□□ -0.77
UBR4Q5T4S7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
UBR4Q5T4S7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 U91328.1-201ENST00000437528 223 ntBASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 GPR182-203ENST00000622922 591 ntBASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 AC005229.4-201ENST00000610085 2198 ntBASIC10.24□□□□□ -0.77
UBR4Q5T4S7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 AP005117.1-201ENST00000584346 1413 ntBASIC10.24□□□□□ -0.77
UBR4Q5T4S7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
UBR4Q5T4S7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 AC092658.1-201ENST00000505836 891 ntBASIC10.23□□□□□ -0.77
UBR4Q5T4S7 COG4-212ENST00000564653 590 ntTSL 5 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 LINC02560-201ENST00000596379 459 ntBASIC10.23□□□□□ -0.77
UBR4Q5T4S7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.23□□□□□ -0.77
UBR4Q5T4S7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.23□□□□□ -0.77
UBR4Q5T4S7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
UBR4Q5T4S7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms