Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 AC004264.1-201ENST00000608354 794 ntBASIC18.06■□□□□ 0.48
PDCD4Q53EL6 AC133041.1-202ENST00000642053 222 ntBASIC18.06■□□□□ 0.48
PDCD4Q53EL6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.06■□□□□ 0.48
PDCD4Q53EL6 AC068880.1-201ENST00000507289 2297 ntBASIC18.06■□□□□ 0.48
PDCD4Q53EL6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDCD4Q53EL6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.05■□□□□ 0.48
PDCD4Q53EL6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 AC069152.1-201ENST00000438030 544 ntBASIC18.05■□□□□ 0.48
PDCD4Q53EL6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 AC068587.9-201ENST00000641814 219 ntBASIC18.05■□□□□ 0.48
PDCD4Q53EL6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDCD4Q53EL6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDCD4Q53EL6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.03■□□□□ 0.48
PDCD4Q53EL6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms