Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 AC092865.7-201ENST00000641832 219 ntBASIC20.56■□□□□ 0.88
NCKAP1LP55160 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
NCKAP1LP55160 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NCKAP1LP55160 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 NEK4P2-201ENST00000580004 1012 ntBASIC20.55■□□□□ 0.88
NCKAP1LP55160 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NCKAP1LP55160 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.55■□□□□ 0.88
NCKAP1LP55160 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 AC034236.2-201ENST00000606662 1610 ntBASIC20.54■□□□□ 0.88
NCKAP1LP55160 ANO7L1-203ENST00000602586 1720 ntBASIC20.54■□□□□ 0.88
NCKAP1LP55160 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.54■□□□□ 0.88
NCKAP1LP55160 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.54■□□□□ 0.88
NCKAP1LP55160 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NCKAP1LP55160 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 AC087289.5-201ENST00000586076 3175 ntBASIC20.53■□□□□ 0.88
NCKAP1LP55160 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 KRT18P41-201ENST00000518924 1277 ntBASIC20.53■□□□□ 0.88
NCKAP1LP55160 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 RN7SL850P-201ENST00000579959 291 ntBASIC20.53■□□□□ 0.88
NCKAP1LP55160 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 HOXB1-202ENST00000577092 1414 ntBASIC20.53■□□□□ 0.88
NCKAP1LP55160 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NCKAP1LP55160 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCKAP1LP55160 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 AC093503.3-201ENST00000624917 2352 ntBASIC20.52■□□□□ 0.88
NCKAP1LP55160 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCKAP1LP55160 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.52■□□□□ 0.88
NCKAP1LP55160 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NCKAP1LP55160 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCKAP1LP55160 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
NCKAP1LP55160 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCKAP1LP55160 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.51■□□□□ 0.87
NCKAP1LP55160 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms