Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.37■□□□□ 0.69
COPAP53621 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
COPAP53621 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.37■□□□□ 0.69
COPAP53621 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPAP53621 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.37■□□□□ 0.69
COPAP53621 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COPAP53621 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 KRT8P11-201ENST00000409686 1436 ntBASIC19.36■□□□□ 0.69
COPAP53621 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
COPAP53621 RNF152P1-201ENST00000397754 604 ntBASIC19.36■□□□□ 0.69
COPAP53621 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
COPAP53621 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.36■□□□□ 0.69
COPAP53621 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 COX11P1-201ENST00000489116 835 ntBASIC19.36■□□□□ 0.69
COPAP53621 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
COPAP53621 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.36■□□□□ 0.69
COPAP53621 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
COPAP53621 MYC-208ENST00000641036 567 ntBASIC19.36■□□□□ 0.69
COPAP53621 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 AIRN-201ENST00000601203 4374 ntBASIC19.36■□□□□ 0.69
COPAP53621 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.36■□□□□ 0.69
COPAP53621 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPAP53621 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
COPAP53621 AC026471.1-201ENST00000564629 3026 ntBASIC19.35■□□□□ 0.69
COPAP53621 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
COPAP53621 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.35■□□□□ 0.69
COPAP53621 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.35■□□□□ 0.69
COPAP53621 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.35■□□□□ 0.69
COPAP53621 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.35■□□□□ 0.69
COPAP53621 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 AP003041.3-201ENST00000527151 707 ntBASIC19.35■□□□□ 0.69
COPAP53621 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
COPAP53621 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
COPAP53621 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPAP53621 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.34■□□□□ 0.69
COPAP53621 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
COPAP53621 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 TSPY5P-201ENST00000426936 936 ntBASIC19.34■□□□□ 0.69
COPAP53621 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.34■□□□□ 0.69
COPAP53621 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 LINC01238-205ENST00000567549 1107 ntBASIC19.34■□□□□ 0.69
COPAP53621 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
COPAP53621 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
COPAP53621 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPAP53621 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COPAP53621 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.34■□□□□ 0.69
COPAP53621 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.33■□□□□ 0.69
COPAP53621 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
COPAP53621 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPAP53621 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.33■□□□□ 0.69
COPAP53621 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COPAP53621 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPAP53621 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COPAP53621 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COPAP53621 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms