Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.36■□□□□ 0.21
HCFC1P51610 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.36■□□□□ 0.21
HCFC1P51610 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 AC007952.6-201ENST00000573168 2673 ntBASIC16.36■□□□□ 0.21
HCFC1P51610 AC003957.1-201ENST00000625108 2673 ntBASIC16.36■□□□□ 0.21
HCFC1P51610 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.36■□□□□ 0.21
HCFC1P51610 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.36■□□□□ 0.21
HCFC1P51610 HOXB1-202ENST00000577092 1414 ntBASIC16.36■□□□□ 0.21
HCFC1P51610 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HCFC1P51610 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.36■□□□□ 0.21
HCFC1P51610 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.36■□□□□ 0.21
HCFC1P51610 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HCFC1P51610 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
HCFC1P51610 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HCFC1P51610 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.35■□□□□ 0.21
HCFC1P51610 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
HCFC1P51610 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.35■□□□□ 0.21
HCFC1P51610 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.35■□□□□ 0.21
HCFC1P51610 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 AC011498.5-201ENST00000592027 486 ntBASIC16.35■□□□□ 0.21
HCFC1P51610 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 PKD1P6-201ENST00000343738 4769 ntBASIC16.35■□□□□ 0.21
HCFC1P51610 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.35■□□□□ 0.21
HCFC1P51610 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.35■□□□□ 0.21
HCFC1P51610 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.35■□□□□ 0.21
HCFC1P51610 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.35■□□□□ 0.21
HCFC1P51610 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.35■□□□□ 0.21
HCFC1P51610 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCFC1P51610 AL158211.5-201ENST00000623583 2518 ntBASIC16.34■□□□□ 0.21
HCFC1P51610 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.34■□□□□ 0.21
HCFC1P51610 KRT8P3-201ENST00000519669 1449 ntBASIC16.34■□□□□ 0.21
HCFC1P51610 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 AC233702.3-201ENST00000578656 1387 ntBASIC16.34■□□□□ 0.21
HCFC1P51610 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.34■□□□□ 0.21
HCFC1P51610 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 KRT18P31-201ENST00000506277 1292 ntBASIC16.34■□□□□ 0.21
HCFC1P51610 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HCFC1P51610 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.34■□□□□ 0.21
HCFC1P51610 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HCFC1P51610 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCFC1P51610 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HCFC1P51610 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HCFC1P51610 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HCFC1P51610 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HCFC1P51610 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HCFC1P51610 LINC00265-3P-201ENST00000447588 903 ntBASIC16.33■□□□□ 0.21
HCFC1P51610 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms