Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB5CP51148 OR6D1P-203ENST00000641209 4860 ntBASIC15.12■□□□□ 0.01
RAB5CP51148 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB5CP51148 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5CP51148 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 AL645608.8-201ENST00000606034 2086 ntBASIC15.12■□□□□ 0.01
RAB5CP51148 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB5CP51148 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB5CP51148 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.12■□□□□ 0.01
RAB5CP51148 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 MIR4767-201ENST00000582827 78 ntBASIC15.12■□□□□ 0.01
RAB5CP51148 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB5CP51148 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
RAB5CP51148 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAB5CP51148 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB5CP51148 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB5CP51148 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.11■□□□□ 0.01
RAB5CP51148 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 AD000864.1-201ENST00000624076 2295 ntBASIC15.11■□□□□ 0.01
RAB5CP51148 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 AC018695.7-201ENST00000624587 2492 ntBASIC15.11■□□□□ 0.01
RAB5CP51148 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RAB5CP51148 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 AL162727.3-201ENST00000635661 2787 ntBASIC15.11■□□□□ 0.01
RAB5CP51148 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB5CP51148 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB5CP51148 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB5CP51148 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.1■□□□□ 0.01
RAB5CP51148 AC138028.4-201ENST00000564984 1845 ntBASIC15.1■□□□□ 0.01
RAB5CP51148 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
RAB5CP51148 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5CP51148 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB5CP51148 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RAB5CP51148 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
RAB5CP51148 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5CP51148 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RAB5CP51148 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.1■□□□□ 0.01
RAB5CP51148 AC012414.1-201ENST00000556676 535 ntBASIC15.1■□□□□ 0.01
RAB5CP51148 SLC7A5P1-201ENST00000568957 537 ntBASIC15.1■□□□□ 0.01
RAB5CP51148 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5CP51148 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.1■□□□□ 0.01
RAB5CP51148 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RAB5CP51148 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms