Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KNTC1P50748 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KNTC1P50748 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.84■□□□□ 0.45
KNTC1P50748 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KNTC1P50748 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.83■□□□□ 0.45
KNTC1P50748 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.83■□□□□ 0.45
KNTC1P50748 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
KNTC1P50748 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.83■□□□□ 0.45
KNTC1P50748 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.83■□□□□ 0.45
KNTC1P50748 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.83■□□□□ 0.45
KNTC1P50748 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KNTC1P50748 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.83■□□□□ 0.45
KNTC1P50748 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.83■□□□□ 0.44
KNTC1P50748 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.83■□□□□ 0.44
KNTC1P50748 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.83■□□□□ 0.44
KNTC1P50748 FAM197Y8-203ENST00000450145 560 ntBASIC17.83■□□□□ 0.44
KNTC1P50748 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
KNTC1P50748 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.83■□□□□ 0.44
KNTC1P50748 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.83■□□□□ 0.44
KNTC1P50748 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.83■□□□□ 0.44
KNTC1P50748 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.83■□□□□ 0.44
KNTC1P50748 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.83■□□□□ 0.44
KNTC1P50748 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KNTC1P50748 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.82■□□□□ 0.44
KNTC1P50748 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.82■□□□□ 0.44
KNTC1P50748 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.82■□□□□ 0.44
KNTC1P50748 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KNTC1P50748 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.82■□□□□ 0.44
KNTC1P50748 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.82■□□□□ 0.44
KNTC1P50748 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
KNTC1P50748 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.82■□□□□ 0.44
KNTC1P50748 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.82■□□□□ 0.44
KNTC1P50748 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.82■□□□□ 0.44
KNTC1P50748 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KNTC1P50748 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KNTC1P50748 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KNTC1P50748 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
KNTC1P50748 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 KRT18P13-201ENST00000400056 1290 ntBASIC17.81■□□□□ 0.44
KNTC1P50748 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 POLD2P1-201ENST00000511220 997 ntBASIC17.81■□□□□ 0.44
KNTC1P50748 SLC25A1P1-201ENST00000528351 927 ntBASIC17.81■□□□□ 0.44
KNTC1P50748 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
KNTC1P50748 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KNTC1P50748 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
KNTC1P50748 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KNTC1P50748 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
KNTC1P50748 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 AC079776.4-201ENST00000511039 504 ntBASIC17.8■□□□□ 0.44
KNTC1P50748 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
KNTC1P50748 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.8■□□□□ 0.44
KNTC1P50748 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KNTC1P50748 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms