Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A9P48067 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC6A9P48067 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A9P48067 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A9P48067 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC6A9P48067 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A9P48067 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A9P48067 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A9P48067 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 HTR7P1-201ENST00000538670 1336 ntBASIC16.62■□□□□ 0.25
SLC6A9P48067 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A9P48067 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A9P48067 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A9P48067 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A9P48067 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A9P48067 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A9P48067 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A9P48067 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.61■□□□□ 0.25
SLC6A9P48067 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A9P48067 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A9P48067 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A9P48067 AC131212.4-201ENST00000623606 975 ntBASIC16.61■□□□□ 0.25
SLC6A9P48067 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SLC6A9P48067 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A9P48067 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SLC6A9P48067 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC6A9P48067 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 AL353807.1-201ENST00000427475 662 ntBASIC16.6■□□□□ 0.25
SLC6A9P48067 TSPY23P-201ENST00000440136 739 ntBASIC16.6■□□□□ 0.25
SLC6A9P48067 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A9P48067 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC6A9P48067 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC6A9P48067 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC6A9P48067 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SLC6A9P48067 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms