Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AF186192.3-201ENST00000583427 947 ntBASIC20.46■□□□□ 0.87
USP8P40818 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.46■□□□□ 0.87
USP8P40818 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.46■□□□□ 0.87
USP8P40818 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP8P40818 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP8P40818 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP8P40818 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.46■□□□□ 0.87
USP8P40818 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.46■□□□□ 0.87
USP8P40818 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP8P40818 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP8P40818 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP8P40818 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP8P40818 AC004980.1-204ENST00000429707 299 ntBASIC20.45■□□□□ 0.86
USP8P40818 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.45■□□□□ 0.86
USP8P40818 AC098590.1-201ENST00000468126 897 ntBASIC20.45■□□□□ 0.86
USP8P40818 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.45■□□□□ 0.86
USP8P40818 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.45■□□□□ 0.86
USP8P40818 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.45■□□□□ 0.86
USP8P40818 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.45■□□□□ 0.86
USP8P40818 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.45■□□□□ 0.86
USP8P40818 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.45■□□□□ 0.86
USP8P40818 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.45■□□□□ 0.86
USP8P40818 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 AC005332.8-201ENST00000622750 2735 ntBASIC20.45■□□□□ 0.86
USP8P40818 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP8P40818 KRT16P1-201ENST00000399124 1418 ntBASIC20.44■□□□□ 0.86
USP8P40818 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.44■□□□□ 0.86
USP8P40818 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.44■□□□□ 0.86
USP8P40818 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
USP8P40818 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
USP8P40818 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.44■□□□□ 0.86
USP8P40818 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 ABHD17AP1-201ENST00000358206 933 ntBASIC20.44■□□□□ 0.86
USP8P40818 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 RARRES2P10-201ENST00000564312 460 ntBASIC20.44■□□□□ 0.86
USP8P40818 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.44■□□□□ 0.86
USP8P40818 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.44■□□□□ 0.86
USP8P40818 AL353708.3-201ENST00000610272 989 ntBASIC20.44■□□□□ 0.86
USP8P40818 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.44■□□□□ 0.86
USP8P40818 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USP8P40818 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.44■□□□□ 0.86
USP8P40818 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP8P40818 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.43■□□□□ 0.86
USP8P40818 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.43■□□□□ 0.86
USP8P40818 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
USP8P40818 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.43■□□□□ 0.86
USP8P40818 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
USP8P40818 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.43■□□□□ 0.86
USP8P40818 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.43■□□□□ 0.86
USP8P40818 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
USP8P40818 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.43■□□□□ 0.86
USP8P40818 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.43■□□□□ 0.86
USP8P40818 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
USP8P40818 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP8P40818 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.42■□□□□ 0.86
USP8P40818 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP8P40818 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USP8P40818 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.42■□□□□ 0.86
USP8P40818 GCSHP5-201ENST00000443090 522 ntBASIC20.42■□□□□ 0.86
USP8P40818 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.42■□□□□ 0.86
USP8P40818 AC073195.1-201ENST00000607241 877 ntBASIC20.42■□□□□ 0.86
USP8P40818 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.42■□□□□ 0.86
USP8P40818 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms