Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SCNN1AP37088 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCNN1AP37088 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCNN1AP37088 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SCNN1AP37088 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.53■□□□□ 0.72
SCNN1AP37088 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.53■□□□□ 0.72
SCNN1AP37088 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.53■□□□□ 0.72
SCNN1AP37088 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.53■□□□□ 0.72
SCNN1AP37088 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCNN1AP37088 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCNN1AP37088 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCNN1AP37088 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
SCNN1AP37088 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.52■□□□□ 0.72
SCNN1AP37088 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.52■□□□□ 0.72
SCNN1AP37088 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCNN1AP37088 NEK4P2-201ENST00000580004 1012 ntBASIC19.52■□□□□ 0.72
SCNN1AP37088 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SCNN1AP37088 AC073592.3-201ENST00000625118 1834 ntBASIC19.52■□□□□ 0.72
SCNN1AP37088 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.52■□□□□ 0.72
SCNN1AP37088 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.52■□□□□ 0.72
SCNN1AP37088 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.52■□□□□ 0.71
SCNN1AP37088 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SCNN1AP37088 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
SCNN1AP37088 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
SCNN1AP37088 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SCNN1AP37088 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SCNN1AP37088 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.51■□□□□ 0.71
SCNN1AP37088 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.51■□□□□ 0.71
SCNN1AP37088 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.51■□□□□ 0.71
SCNN1AP37088 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
SCNN1AP37088 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SCNN1AP37088 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCNN1AP37088 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SCNN1AP37088 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SCNN1AP37088 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SCNN1AP37088 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SCNN1AP37088 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
SCNN1AP37088 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.5■□□□□ 0.71
SCNN1AP37088 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SCNN1AP37088 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SCNN1AP37088 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.5■□□□□ 0.71
SCNN1AP37088 SLC25A3P1-201ENST00000443844 931 ntBASIC19.5■□□□□ 0.71
SCNN1AP37088 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.5■□□□□ 0.71
SCNN1AP37088 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.5■□□□□ 0.71
SCNN1AP37088 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.5■□□□□ 0.71
SCNN1AP37088 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SCNN1AP37088 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.5■□□□□ 0.71
SCNN1AP37088 AC133561.5-201ENST00000635547 218 ntBASIC19.5■□□□□ 0.71
SCNN1AP37088 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.5■□□□□ 0.71
SCNN1AP37088 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SCNN1AP37088 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.5■□□□□ 0.71
SCNN1AP37088 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.5■□□□□ 0.71
SCNN1AP37088 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SCNN1AP37088 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SCNN1AP37088 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SCNN1AP37088 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.49■□□□□ 0.71
SCNN1AP37088 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SCNN1AP37088 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms