Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GDF1P27539 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GDF1P27539 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 BCL2-203ENST00000589955 5011 ntBASIC17.04■□□□□ 0.32
GDF1P27539 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
GDF1P27539 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDF1P27539 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF1P27539 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 HOMER2P1-201ENST00000455653 964 ntBASIC17.04■□□□□ 0.32
GDF1P27539 AL359075.1-203ENST00000462729 1002 ntBASIC17.04■□□□□ 0.32
GDF1P27539 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.04■□□□□ 0.32
GDF1P27539 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.04■□□□□ 0.32
GDF1P27539 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.04■□□□□ 0.32
GDF1P27539 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDF1P27539 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GDF1P27539 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GDF1P27539 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
GDF1P27539 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.03■□□□□ 0.32
GDF1P27539 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
GDF1P27539 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.03■□□□□ 0.32
GDF1P27539 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GDF1P27539 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GDF1P27539 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GDF1P27539 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GDF1P27539 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GDF1P27539 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GDF1P27539 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GDF1P27539 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 AC116562.4-201ENST00000641316 2276 ntBASIC17.02■□□□□ 0.32
GDF1P27539 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 FAM8A6P-201ENST00000407496 1135 ntBASIC17.02■□□□□ 0.32
GDF1P27539 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.02■□□□□ 0.32
GDF1P27539 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GDF1P27539 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GDF1P27539 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.02■□□□□ 0.31
GDF1P27539 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
GDF1P27539 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GDF1P27539 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
GDF1P27539 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms