Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PMS2P2-201ENST00000425039 1128 ntBASIC23.03■■□□□ 1.28
KCNA3P22001 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNA3P22001 AC027796.2-201ENST00000575326 344 ntBASIC23.03■■□□□ 1.28
KCNA3P22001 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNA3P22001 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.03■■□□□ 1.28
KCNA3P22001 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNA3P22001 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
KCNA3P22001 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNA3P22001 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNA3P22001 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNA3P22001 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
KCNA3P22001 AC073314.1-201ENST00000568729 2216 ntBASIC23.02■■□□□ 1.28
KCNA3P22001 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.02■■□□□ 1.28
KCNA3P22001 AC011840.4-201ENST00000578471 627 ntBASIC23.02■■□□□ 1.28
KCNA3P22001 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNA3P22001 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNA3P22001 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
KCNA3P22001 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
KCNA3P22001 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNA3P22001 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNA3P22001 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNA3P22001 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNA3P22001 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNA3P22001 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNA3P22001 MIR3180-4-201ENST00000582223 153 ntBASIC23.01■■□□□ 1.27
KCNA3P22001 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNA3P22001 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
KCNA3P22001 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNA3P22001 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
KCNA3P22001 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNA3P22001 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.01■■□□□ 1.27
KCNA3P22001 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
KCNA3P22001 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 UPF3AP3-201ENST00000420996 769 ntBASIC23■■□□□ 1.27
KCNA3P22001 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23■■□□□ 1.27
KCNA3P22001 FGFR3P6-201ENST00000457012 610 ntBASIC23■■□□□ 1.27
KCNA3P22001 AP001160.2-201ENST00000596071 487 ntBASIC23■■□□□ 1.27
KCNA3P22001 AC140113.2-201ENST00000604370 208 ntBASIC23■■□□□ 1.27
KCNA3P22001 AL355877.3-201ENST00000622820 899 ntBASIC23■■□□□ 1.27
KCNA3P22001 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23■■□□□ 1.27
KCNA3P22001 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23■■□□□ 1.27
KCNA3P22001 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.99■■□□□ 1.27
KCNA3P22001 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.99■■□□□ 1.27
KCNA3P22001 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.99■■□□□ 1.27
KCNA3P22001 IGHV3-22-201ENST00000520721 359 ntBASIC22.99■■□□□ 1.27
KCNA3P22001 AC145285.3-201ENST00000564603 959 ntBASIC22.99■■□□□ 1.27
KCNA3P22001 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.99■■□□□ 1.27
KCNA3P22001 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.99■■□□□ 1.27
KCNA3P22001 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.99■■□□□ 1.27
KCNA3P22001 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.99■■□□□ 1.27
KCNA3P22001 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
KCNA3P22001 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNA3P22001 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
KCNA3P22001 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
KCNA3P22001 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
KCNA3P22001 RPSAP43-201ENST00000402237 625 ntBASIC22.98■■□□□ 1.27
KCNA3P22001 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.98■■□□□ 1.27
KCNA3P22001 SCARNA2-201ENST00000458748 420 ntBASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms