Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.58■■□□□ 1.04
CAPN2P17655 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.58■■□□□ 1.04
CAPN2P17655 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CAPN2P17655 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CAPN2P17655 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN2P17655 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN2P17655 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CAPN2P17655 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.57■■□□□ 1.04
CAPN2P17655 TSPY19P-201ENST00000418461 509 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 TSPY18P-201ENST00000441642 509 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 UNC93B7-201ENST00000509439 705 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 AC104692.2-201ENST00000603054 253 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.57■■□□□ 1.04
CAPN2P17655 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 AC016734.2-201ENST00000624325 1377 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN2P17655 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.57■■□□□ 1.04
CAPN2P17655 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 BX119927.1-201ENST00000636596 1552 ntBASIC21.57■■□□□ 1.04
CAPN2P17655 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CAPN2P17655 AL049796.1-201ENST00000565336 1766 ntBASIC21.56■■□□□ 1.04
CAPN2P17655 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN2P17655 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CAPN2P17655 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN2P17655 SPDYE15P-201ENST00000424157 909 ntBASIC21.56■■□□□ 1.04
CAPN2P17655 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN2P17655 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN2P17655 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.56■■□□□ 1.04
CAPN2P17655 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.56■■□□□ 1.04
CAPN2P17655 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CAPN2P17655 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN2P17655 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.56■■□□□ 1.04
CAPN2P17655 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CAPN2P17655 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN2P17655 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CAPN2P17655 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.56■■□□□ 1.04
CAPN2P17655 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.55■■□□□ 1.04
CAPN2P17655 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CAPN2P17655 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CAPN2P17655 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CAPN2P17655 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.55■■□□□ 1.04
CAPN2P17655 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 KRT8P26-201ENST00000534154 1276 ntBASIC21.55■■□□□ 1.04
CAPN2P17655 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CAPN2P17655 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CAPN2P17655 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CAPN2P17655 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CAPN2P17655 KRT18P1-202ENST00000452408 1331 ntBASIC21.55■■□□□ 1.04
CAPN2P17655 LTB4R2-202ENST00000528054 3092 ntBASIC21.54■■□□□ 1.04
CAPN2P17655 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CAPN2P17655 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 NEFHP1-201ENST00000412845 2629 ntBASIC21.54■■□□□ 1.04
CAPN2P17655 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.54■■□□□ 1.04
CAPN2P17655 IFNL4P1-201ENST00000607083 540 ntBASIC21.54■■□□□ 1.04
CAPN2P17655 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN2P17655 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CAPN2P17655 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CAPN2P17655 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.54■■□□□ 1.04
CAPN2P17655 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN2P17655 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.53■■□□□ 1.04
CAPN2P17655 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN2P17655 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.53■■□□□ 1.04
CAPN2P17655 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CAPN2P17655 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms