Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.49■□□□□ 0.71
HMGA1P17096 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA1P17096 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.49■□□□□ 0.71
HMGA1P17096 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HMGA1P17096 HEIH-201ENST00000623091 1652 ntBASIC19.49■□□□□ 0.71
HMGA1P17096 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA1P17096 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HMGA1P17096 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA1P17096 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.48■□□□□ 0.71
HMGA1P17096 AL161938.1-201ENST00000569833 2180 ntBASIC19.48■□□□□ 0.71
HMGA1P17096 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA1P17096 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.48■□□□□ 0.71
HMGA1P17096 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HMGA1P17096 AC016734.2-201ENST00000624325 1377 ntBASIC19.47■□□□□ 0.71
HMGA1P17096 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.47■□□□□ 0.71
HMGA1P17096 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HMGA1P17096 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.47■□□□□ 0.71
HMGA1P17096 KRT18P48-201ENST00000434763 852 ntBASIC19.47■□□□□ 0.71
HMGA1P17096 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.47■□□□□ 0.71
HMGA1P17096 AC005332.7-201ENST00000614046 2005 ntBASIC19.47■□□□□ 0.71
HMGA1P17096 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA1P17096 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA1P17096 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA1P17096 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HMGA1P17096 AL357033.4-201ENST00000617703 1807 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 MTMR9LP-203ENST00000426597 1545 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.46■□□□□ 0.71
HMGA1P17096 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.46■□□□□ 0.71
HMGA1P17096 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 DUSP5P1-201ENST00000441325 1139 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.46■□□□□ 0.71
HMGA1P17096 MIR3180-4-201ENST00000582223 153 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 Z98044.1-201ENST00000632503 1764 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 AL049812.1-201ENST00000432563 2267 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HMGA1P17096 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HMGA1P17096 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HMGA1P17096 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HMGA1P17096 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.46■□□□□ 0.71
HMGA1P17096 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.45■□□□□ 0.7
HMGA1P17096 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HMGA1P17096 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.45■□□□□ 0.7
HMGA1P17096 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.45■□□□□ 0.7
HMGA1P17096 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HMGA1P17096 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HMGA1P17096 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HMGA1P17096 AC093525.10-201ENST00000625130 1569 ntBASIC19.44■□□□□ 0.7
HMGA1P17096 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HMGA1P17096 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms