Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KRT13P13646 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.55■□□□□ 0.88
KRT13P13646 CRYGFP-201ENST00000418459 633 ntBASIC20.55■□□□□ 0.88
KRT13P13646 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT13P13646 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRT13P13646 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.55■□□□□ 0.88
KRT13P13646 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.55■□□□□ 0.88
KRT13P13646 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.55■□□□□ 0.88
KRT13P13646 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT13P13646 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT13P13646 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
KRT13P13646 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
KRT13P13646 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
KRT13P13646 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.54■□□□□ 0.88
KRT13P13646 KRT17P2-201ENST00000300992 1314 ntBASIC20.54■□□□□ 0.88
KRT13P13646 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
KRT13P13646 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
KRT13P13646 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KRT13P13646 UNC93B2-201ENST00000285383 730 ntBASIC20.54■□□□□ 0.88
KRT13P13646 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.54■□□□□ 0.88
KRT13P13646 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
KRT13P13646 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.54■□□□□ 0.88
KRT13P13646 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.54■□□□□ 0.88
KRT13P13646 Z98044.1-201ENST00000632503 1764 ntBASIC20.54■□□□□ 0.88
KRT13P13646 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
KRT13P13646 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.54■□□□□ 0.88
KRT13P13646 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT13P13646 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
KRT13P13646 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT13P13646 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT13P13646 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT13P13646 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.53■□□□□ 0.88
KRT13P13646 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.53■□□□□ 0.88
KRT13P13646 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.53■□□□□ 0.88
KRT13P13646 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.53■□□□□ 0.88
KRT13P13646 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
KRT13P13646 AL512353.2-201ENST00000448759 1962 ntBASIC20.53■□□□□ 0.88
KRT13P13646 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRT13P13646 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRT13P13646 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRT13P13646 AL031598.1-201ENST00000561511 1773 ntBASIC20.52■□□□□ 0.88
KRT13P13646 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT13P13646 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
KRT13P13646 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
KRT13P13646 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT13P13646 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT13P13646 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
KRT13P13646 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.52■□□□□ 0.88
KRT13P13646 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRT13P13646 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT13P13646 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
KRT13P13646 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT13P13646 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRT13P13646 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms