Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNB1P11230 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.03■□□□□ 0.64
CHRNB1P11230 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNB1P11230 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNB1P11230 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNB1P11230 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNB1P11230 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNB1P11230 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNB1P11230 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNB1P11230 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHRNB1P11230 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNB1P11230 AC106795.1-205ENST00000512851 1056 ntBASIC19.02■□□□□ 0.64
CHRNB1P11230 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
CHRNB1P11230 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 GPALPP1-207ENST00000611650 899 ntBASIC19.02■□□□□ 0.64
CHRNB1P11230 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 AC004263.2-201ENST00000617183 678 ntBASIC19.02■□□□□ 0.64
CHRNB1P11230 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.02■□□□□ 0.64
CHRNB1P11230 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CHRNB1P11230 GABARAPL3-202ENST00000624044 1851 ntBASIC19.02■□□□□ 0.64
CHRNB1P11230 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNB1P11230 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNB1P11230 Z83836.1-201ENST00000624605 1642 ntBASIC19.02■□□□□ 0.64
CHRNB1P11230 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNB1P11230 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNB1P11230 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.02■□□□□ 0.63
CHRNB1P11230 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CHRNB1P11230 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNB1P11230 AC099778.1-201ENST00000568593 1911 ntBASIC19.02■□□□□ 0.63
CHRNB1P11230 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CHRNB1P11230 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNB1P11230 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHRNB1P11230 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHRNB1P11230 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNB1P11230 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNB1P11230 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNB1P11230 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHRNB1P11230 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 AP002469.2-201ENST00000531724 424 ntBASIC19.01■□□□□ 0.63
CHRNB1P11230 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRNB1P11230 SLC25A6P4-201ENST00000586535 553 ntBASIC19.01■□□□□ 0.63
CHRNB1P11230 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.01■□□□□ 0.63
CHRNB1P11230 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 AC006538.3-201ENST00000612495 578 ntBASIC19.01■□□□□ 0.63
CHRNB1P11230 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNB1P11230 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNB1P11230 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNB1P11230 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19■□□□□ 0.63
CHRNB1P11230 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19■□□□□ 0.63
CHRNB1P11230 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19■□□□□ 0.63
CHRNB1P11230 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19■□□□□ 0.63
CHRNB1P11230 BMF-207ENST00000559701 630 ntTSL 3 BASIC19■□□□□ 0.63
CHRNB1P11230 AC090616.6-201ENST00000582640 721 ntBASIC19■□□□□ 0.63
CHRNB1P11230 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHRNB1P11230 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CHRNB1P11230 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNB1P11230 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19■□□□□ 0.63
CHRNB1P11230 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19■□□□□ 0.63
CHRNB1P11230 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19■□□□□ 0.63
CHRNB1P11230 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNB1P11230 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHRNB1P11230 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNB1P11230 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHRNB1P11230 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNB1P11230 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRNB1P11230 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHRNB1P11230 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHRNB1P11230 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNB1P11230 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRNB1P11230 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms