Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.86■□□□□ 0.77
RB1P06400 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 PMS2P1-201ENST00000431037 1228 ntBASIC19.86■□□□□ 0.77
RB1P06400 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.86■□□□□ 0.77
RB1P06400 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.86■□□□□ 0.77
RB1P06400 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.86■□□□□ 0.77
RB1P06400 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.86■□□□□ 0.77
RB1P06400 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RB1P06400 AC024563.2-201ENST00000603282 481 ntBASIC19.86■□□□□ 0.77
RB1P06400 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.86■□□□□ 0.77
RB1P06400 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.86■□□□□ 0.77
RB1P06400 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RB1P06400 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
RB1P06400 AC099778.1-201ENST00000568593 1911 ntBASIC19.85■□□□□ 0.77
RB1P06400 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.85■□□□□ 0.77
RB1P06400 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RB1P06400 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RB1P06400 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RB1P06400 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.85■□□□□ 0.77
RB1P06400 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.85■□□□□ 0.77
RB1P06400 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RB1P06400 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.85■□□□□ 0.77
RB1P06400 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RB1P06400 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RB1P06400 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RB1P06400 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RB1P06400 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 AC034236.2-201ENST00000606662 1610 ntBASIC19.84■□□□□ 0.77
RB1P06400 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.84■□□□□ 0.77
RB1P06400 POM121L3P-201ENST00000419331 1163 ntBASIC19.84■□□□□ 0.77
RB1P06400 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RB1P06400 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.84■□□□□ 0.77
RB1P06400 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.84■□□□□ 0.77
RB1P06400 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.84■□□□□ 0.77
RB1P06400 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.84■□□□□ 0.77
RB1P06400 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.84■□□□□ 0.77
RB1P06400 NSUN5P1-202ENST00000421140 1535 ntBASIC19.84■□□□□ 0.77
RB1P06400 NSUN5P2-203ENST00000457352 1529 ntBASIC19.84■□□□□ 0.77
RB1P06400 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RB1P06400 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.83■□□□□ 0.77
RB1P06400 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.83■□□□□ 0.77
RB1P06400 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 TSPY12P-201ENST00000421279 868 ntBASIC19.83■□□□□ 0.77
RB1P06400 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.83■□□□□ 0.77
RB1P06400 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.83■□□□□ 0.77
RB1P06400 AF238378.1-201ENST00000526806 358 ntBASIC19.83■□□□□ 0.77
RB1P06400 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.83■□□□□ 0.77
RB1P06400 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RB1P06400 AP001005.1-201ENST00000571755 1248 ntBASIC19.83■□□□□ 0.77
RB1P06400 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.83■□□□□ 0.77
RB1P06400 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RB1P06400 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RB1P06400 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.83■□□□□ 0.77
RB1P06400 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.83■□□□□ 0.77
RB1P06400 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RB1P06400 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.83■□□□□ 0.76
RB1P06400 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RB1P06400 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
RB1P06400 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RB1P06400 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RB1P06400 KRT89P-201ENST00000620027 1478 ntBASIC19.82■□□□□ 0.76
RB1P06400 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RB1P06400 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.82■□□□□ 0.76
RB1P06400 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.82■□□□□ 0.76
RB1P06400 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.82■□□□□ 0.76
RB1P06400 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.82■□□□□ 0.76
RB1P06400 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms