Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 NIFKP9-201ENST00000419265 221 ntBASIC17.15■□□□□ 0.34
HIST1H2ABP04908 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HIST1H2ABP04908 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HIST1H2ABP04908 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
HIST1H2ABP04908 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 KSR1P1-201ENST00000446298 240 ntBASIC17.14■□□□□ 0.33
HIST1H2ABP04908 RPPH1-201ENST00000516869 333 ntBASIC17.14■□□□□ 0.33
HIST1H2ABP04908 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 MIR4651-201ENST00000582622 73 ntBASIC17.14■□□□□ 0.33
HIST1H2ABP04908 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 KRT8P41-201ENST00000533985 1514 ntBASIC17.14■□□□□ 0.33
HIST1H2ABP04908 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HIST1H2ABP04908 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 Z98044.1-201ENST00000632503 1764 ntBASIC17.13■□□□□ 0.33
HIST1H2ABP04908 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HIST1H2ABP04908 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HIST1H2ABP04908 KRT18P29-201ENST00000397031 1267 ntBASIC17.12■□□□□ 0.33
HIST1H2ABP04908 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms