Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
MT-ND1P03886 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MT-ND1P03886 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.73■□□□□ 0.43
MT-ND1P03886 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND1P03886 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND1P03886 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MT-ND1P03886 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.73■□□□□ 0.43
MT-ND1P03886 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-ND1P03886 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.73■□□□□ 0.43
MT-ND1P03886 AC097658.1-201ENST00000475555 843 ntBASIC17.73■□□□□ 0.43
MT-ND1P03886 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.73■□□□□ 0.43
MT-ND1P03886 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MT-ND1P03886 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-ND1P03886 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
MT-ND1P03886 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-ND1P03886 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MT-ND1P03886 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
MT-ND1P03886 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-ND1P03886 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-ND1P03886 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-ND1P03886 HLA-B-256ENST00000639848 1089 ntBASIC17.72■□□□□ 0.43
MT-ND1P03886 MYC-209ENST00000641252 345 ntBASIC17.72■□□□□ 0.43
MT-ND1P03886 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
MT-ND1P03886 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-ND1P03886 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 AP006587.1-201ENST00000534129 1502 ntBASIC17.72■□□□□ 0.43
MT-ND1P03886 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-ND1P03886 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
MT-ND1P03886 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND1P03886 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND1P03886 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-ND1P03886 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.71■□□□□ 0.43
MT-ND1P03886 RPS2P52-201ENST00000469610 820 ntBASIC17.71■□□□□ 0.43
MT-ND1P03886 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-ND1P03886 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND1P03886 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
MT-ND1P03886 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.71■□□□□ 0.43
MT-ND1P03886 AC008764.6-201ENST00000595909 2069 ntBASIC17.71■□□□□ 0.43
MT-ND1P03886 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-ND1P03886 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-ND1P03886 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-ND1P03886 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-ND1P03886 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms