Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BEST1O76090 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BEST1O76090 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 AP000974.1-201ENST00000623909 2387 ntBASIC19.72■□□□□ 0.75
BEST1O76090 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST1O76090 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
BEST1O76090 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.72■□□□□ 0.75
BEST1O76090 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.72■□□□□ 0.75
BEST1O76090 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.72■□□□□ 0.75
BEST1O76090 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.72■□□□□ 0.75
BEST1O76090 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.72■□□□□ 0.75
BEST1O76090 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.72■□□□□ 0.75
BEST1O76090 AC022616.7-201ENST00000525383 220 ntBASIC19.72■□□□□ 0.75
BEST1O76090 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.72■□□□□ 0.75
BEST1O76090 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.72■□□□□ 0.75
BEST1O76090 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.72■□□□□ 0.75
BEST1O76090 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.72■□□□□ 0.75
BEST1O76090 NTF6B-201ENST00000591913 560 ntBASIC19.72■□□□□ 0.75
BEST1O76090 AL445228.2-201ENST00000605589 952 ntBASIC19.72■□□□□ 0.75
BEST1O76090 AC024243.1-201ENST00000609234 778 ntBASIC19.72■□□□□ 0.75
BEST1O76090 AC083906.6-201ENST00000641366 219 ntBASIC19.72■□□□□ 0.75
BEST1O76090 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BEST1O76090 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
BEST1O76090 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.71■□□□□ 0.75
BEST1O76090 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
BEST1O76090 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.71■□□□□ 0.75
BEST1O76090 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.71■□□□□ 0.75
BEST1O76090 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 AL031432.5-201ENST00000641059 760 ntBASIC19.71■□□□□ 0.75
BEST1O76090 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
BEST1O76090 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.71■□□□□ 0.75
BEST1O76090 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BEST1O76090 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
BEST1O76090 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BEST1O76090 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.7■□□□□ 0.74
BEST1O76090 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 KRT18P38-201ENST00000449496 1282 ntBASIC19.7■□□□□ 0.74
BEST1O76090 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.7■□□□□ 0.74
BEST1O76090 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.7■□□□□ 0.74
BEST1O76090 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.7■□□□□ 0.74
BEST1O76090 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
BEST1O76090 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
BEST1O76090 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BEST1O76090 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
BEST1O76090 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.69■□□□□ 0.74
BEST1O76090 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
BEST1O76090 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BEST1O76090 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.69■□□□□ 0.74
BEST1O76090 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.69■□□□□ 0.74
BEST1O76090 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.69■□□□□ 0.74
BEST1O76090 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms