Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKL5O76039 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDKL5O76039 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.84■■□□□ 1.09
CDKL5O76039 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.84■■□□□ 1.09
CDKL5O76039 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
CDKL5O76039 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.84■■□□□ 1.09
CDKL5O76039 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CDKL5O76039 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
CDKL5O76039 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKL5O76039 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKL5O76039 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.84■■□□□ 1.09
CDKL5O76039 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 WIZP1-201ENST00000531444 2299 ntBASIC21.83■■□□□ 1.09
CDKL5O76039 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.83■■□□□ 1.09
CDKL5O76039 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.83■■□□□ 1.09
CDKL5O76039 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDKL5O76039 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 AL109659.2-201ENST00000606809 1674 ntBASIC21.83■■□□□ 1.09
CDKL5O76039 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CDKL5O76039 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.83■■□□□ 1.09
CDKL5O76039 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.83■■□□□ 1.09
CDKL5O76039 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CDKL5O76039 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CDKL5O76039 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKL5O76039 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDKL5O76039 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CDKL5O76039 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.83■■□□□ 1.08
CDKL5O76039 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDKL5O76039 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CDKL5O76039 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CDKL5O76039 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.08
CDKL5O76039 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CDKL5O76039 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CDKL5O76039 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.82■■□□□ 1.08
CDKL5O76039 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDKL5O76039 MIR4497-201ENST00000583208 89 ntBASIC21.82■■□□□ 1.08
CDKL5O76039 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 MYC-208ENST00000641036 567 ntBASIC21.82■■□□□ 1.08
CDKL5O76039 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.82■■□□□ 1.08
CDKL5O76039 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.82■■□□□ 1.08
CDKL5O76039 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.82■■□□□ 1.08
CDKL5O76039 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKL5O76039 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.82■■□□□ 1.08
CDKL5O76039 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.81■■□□□ 1.08
CDKL5O76039 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.81■■□□□ 1.08
CDKL5O76039 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CDKL5O76039 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDKL5O76039 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.81■■□□□ 1.08
CDKL5O76039 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.81■■□□□ 1.08
CDKL5O76039 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.81■■□□□ 1.08
CDKL5O76039 AC008622.2-201ENST00000617006 1229 ntBASIC21.81■■□□□ 1.08
CDKL5O76039 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.81■■□□□ 1.08
CDKL5O76039 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CDKL5O76039 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.81■■□□□ 1.08
CDKL5O76039 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKL5O76039 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKL5O76039 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CDKL5O76039 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKL5O76039 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms