Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RFPL1O75677 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.88■□□□□ 0.61
RFPL1O75677 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.88■□□□□ 0.61
RFPL1O75677 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.88■□□□□ 0.61
RFPL1O75677 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.88■□□□□ 0.61
RFPL1O75677 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RFPL1O75677 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RFPL1O75677 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 KRASP1-201ENST00000407852 552 ntBASIC18.87■□□□□ 0.61
RFPL1O75677 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.87■□□□□ 0.61
RFPL1O75677 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.87■□□□□ 0.61
RFPL1O75677 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RFPL1O75677 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RFPL1O75677 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.86■□□□□ 0.61
RFPL1O75677 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.86■□□□□ 0.61
RFPL1O75677 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.86■□□□□ 0.61
RFPL1O75677 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RFPL1O75677 AC010331.1-201ENST00000611423 582 ntBASIC18.86■□□□□ 0.61
RFPL1O75677 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.86■□□□□ 0.61
RFPL1O75677 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RFPL1O75677 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RFPL1O75677 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RFPL1O75677 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.85■□□□□ 0.61
RFPL1O75677 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.85■□□□□ 0.61
RFPL1O75677 KRT18P21-201ENST00000515767 1272 ntBASIC18.85■□□□□ 0.61
RFPL1O75677 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.85■□□□□ 0.61
RFPL1O75677 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RFPL1O75677 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RFPL1O75677 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFPL1O75677 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
RFPL1O75677 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFPL1O75677 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.84■□□□□ 0.61
RFPL1O75677 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFPL1O75677 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFPL1O75677 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFPL1O75677 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFPL1O75677 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms