Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 AC004980.1-204ENST00000429707 299 ntBASIC18.71■□□□□ 0.59
PHGDHO43175 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
PHGDHO43175 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.71■□□□□ 0.59
PHGDHO43175 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.71■□□□□ 0.59
PHGDHO43175 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.71■□□□□ 0.59
PHGDHO43175 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PHGDHO43175 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.71■□□□□ 0.59
PHGDHO43175 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHGDHO43175 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PHGDHO43175 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.58
PHGDHO43175 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
PHGDHO43175 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PHGDHO43175 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PHGDHO43175 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.7■□□□□ 0.58
PHGDHO43175 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.7■□□□□ 0.58
PHGDHO43175 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PHGDHO43175 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PHGDHO43175 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 NIFKP9-201ENST00000419265 221 ntBASIC18.7■□□□□ 0.58
PHGDHO43175 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.7■□□□□ 0.58
PHGDHO43175 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 RPS2P4-201ENST00000476944 856 ntBASIC18.7■□□□□ 0.58
PHGDHO43175 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.7■□□□□ 0.58
PHGDHO43175 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.7■□□□□ 0.58
PHGDHO43175 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.7■□□□□ 0.58
PHGDHO43175 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.7■□□□□ 0.58
PHGDHO43175 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 AL499627.1-201ENST00000569373 2188 ntBASIC18.7■□□□□ 0.58
PHGDHO43175 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
PHGDHO43175 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.7■□□□□ 0.58
PHGDHO43175 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHGDHO43175 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
PHGDHO43175 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
PHGDHO43175 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.69■□□□□ 0.58
PHGDHO43175 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PHGDHO43175 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PHGDHO43175 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PHGDHO43175 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.69■□□□□ 0.58
PHGDHO43175 MIR4651-201ENST00000582622 73 ntBASIC18.69■□□□□ 0.58
PHGDHO43175 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PHGDHO43175 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.69■□□□□ 0.58
PHGDHO43175 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.69■□□□□ 0.58
PHGDHO43175 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PHGDHO43175 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 HTR7P1-201ENST00000538670 1336 ntBASIC18.69■□□□□ 0.58
PHGDHO43175 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.69■□□□□ 0.58
PHGDHO43175 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHGDHO43175 AL354751.1-201ENST00000412768 1863 ntBASIC18.69■□□□□ 0.58
PHGDHO43175 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms