Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.1■□□□□ 0.81
SPTLC1O15269 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.1■□□□□ 0.81
SPTLC1O15269 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.1■□□□□ 0.81
SPTLC1O15269 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.1■□□□□ 0.81
SPTLC1O15269 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.1■□□□□ 0.81
SPTLC1O15269 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.1■□□□□ 0.81
SPTLC1O15269 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SPTLC1O15269 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SPTLC1O15269 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTLC1O15269 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.1■□□□□ 0.81
SPTLC1O15269 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.1■□□□□ 0.81
SPTLC1O15269 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SPTLC1O15269 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.09■□□□□ 0.81
SPTLC1O15269 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
SPTLC1O15269 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.09■□□□□ 0.81
SPTLC1O15269 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTLC1O15269 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTLC1O15269 AL359075.1-203ENST00000462729 1002 ntBASIC20.09■□□□□ 0.81
SPTLC1O15269 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTLC1O15269 KRT18P56-201ENST00000507275 550 ntBASIC20.09■□□□□ 0.81
SPTLC1O15269 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTLC1O15269 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.09■□□□□ 0.81
SPTLC1O15269 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.09■□□□□ 0.81
SPTLC1O15269 AL121894.2-201ENST00000602977 491 ntBASIC20.09■□□□□ 0.81
SPTLC1O15269 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.09■□□□□ 0.81
SPTLC1O15269 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPTLC1O15269 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.09■□□□□ 0.81
SPTLC1O15269 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SPTLC1O15269 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SPTLC1O15269 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.08■□□□□ 0.81
SPTLC1O15269 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.08■□□□□ 0.81
SPTLC1O15269 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTLC1O15269 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.08■□□□□ 0.81
SPTLC1O15269 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.08■□□□□ 0.81
SPTLC1O15269 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPTLC1O15269 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.08■□□□□ 0.81
SPTLC1O15269 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTLC1O15269 AC068587.9-201ENST00000641814 219 ntBASIC20.08■□□□□ 0.81
SPTLC1O15269 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SPTLC1O15269 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
SPTLC1O15269 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SPTLC1O15269 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.8
SPTLC1O15269 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPTLC1O15269 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTLC1O15269 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.07■□□□□ 0.8
SPTLC1O15269 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SPTLC1O15269 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 AP000523.1-201ENST00000398242 1049 ntBASIC20.07■□□□□ 0.8
SPTLC1O15269 AL031133.1-201ENST00000406807 723 ntBASIC20.07■□□□□ 0.8
SPTLC1O15269 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 AC092647.4-201ENST00000457211 535 ntBASIC20.07■□□□□ 0.8
SPTLC1O15269 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SPTLC1O15269 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 AC024243.1-201ENST00000609234 778 ntBASIC20.07■□□□□ 0.8
SPTLC1O15269 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms