Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 AL590326.2-201ENST00000625139 305 ntBASIC17.93■□□□□ 0.46
PCDH17O14917 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDH17O14917 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PCDH17O14917 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH17O14917 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.92■□□□□ 0.46
PCDH17O14917 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDH17O14917 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.92■□□□□ 0.46
PCDH17O14917 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 AL049597.2-201ENST00000565575 961 ntBASIC17.92■□□□□ 0.46
PCDH17O14917 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH17O14917 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH17O14917 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PCDH17O14917 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH17O14917 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 TEX21P-204ENST00000641479 1693 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 TERF1P1-201ENST00000311003 1181 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 ARMC10P1-201ENST00000313754 855 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 AC005521.1-201ENST00000393351 872 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH17O14917 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH17O14917 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 ATP5G1P1-201ENST00000448724 379 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 AL353719.1-201ENST00000566847 864 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH17O14917 AL023803.3-201ENST00000615559 522 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH17O14917 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 LETM1P2-201ENST00000597330 2178 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 AC104417.2-201ENST00000562989 1793 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDH17O14917 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH17O14917 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 AC006333.2-201ENST00000607957 2099 ntBASIC17.91■□□□□ 0.46
PCDH17O14917 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH17O14917 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH17O14917 AC092338.2-201ENST00000568827 1415 ntBASIC17.9■□□□□ 0.46
PCDH17O14917 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms