Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMKR1H3BMG3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMKR1H3BMG3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMKR1H3BMG3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 AL162741.1-201ENST00000565563 1558 ntBASIC13.74□□□□□ -0.21
SMKR1H3BMG3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SMKR1H3BMG3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SMKR1H3BMG3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms