Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC01549A6NIU2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 AC123595.1-201ENST00000440769 1046 ntBASIC13.36□□□□□ -0.27
LINC01549A6NIU2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 MIR6084-201ENST00000622012 110 ntBASIC13.36□□□□□ -0.27
LINC01549A6NIU2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 KRT8P8-201ENST00000434750 1448 ntBASIC13.36□□□□□ -0.27
LINC01549A6NIU2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 AC124067.4-201ENST00000519691 2379 ntBASIC13.36□□□□□ -0.27
LINC01549A6NIU2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01549A6NIU2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 SDHAP1-207ENST00000440850 2000 ntBASIC13.35□□□□□ -0.27
LINC01549A6NIU2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01549A6NIU2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 TSPY21P-201ENST00000433481 731 ntBASIC13.34□□□□□ -0.27
LINC01549A6NIU2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01549A6NIU2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms