Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 RAP2CP1-201ENST00000605103 478 ntBASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 MYC-208ENST00000641036 567 ntBASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 AC080080.1-201ENST00000625121 2420 ntBASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRBV3S1A0A5B6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AC007322.1-201ENST00000426983 750 ntBASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AC006557.6-201ENST00000623071 864 ntBASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AC108860.2-201ENST00000562760 2183 ntBASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 REXO1L9P-201ENST00000604264 2108 ntBASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRBV3S1A0A5B6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 AC112777.1-201ENST00000540175 1423 ntBASIC17.58■□□□□ 0.41
TCRBV3S1A0A5B6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRBV3S1A0A5B6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 FLJ13224-201ENST00000313737 1514 ntBASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 AC008556.1-201ENST00000610908 2040 ntBASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 KRT8P45-201ENST00000414328 1447 ntBASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRBV3S1A0A5B6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms