Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 AC112777.1-201ENST00000540175 1423 ntBASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 SIRPAP1-201ENST00000448467 1770 ntBASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 AC006557.6-201ENST00000623071 864 ntBASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 PRORSD1P-202ENST00000563365 2154 ntBASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
DUXBA0A1W2PPF3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 AL121829.2-201ENST00000620908 328 ntBASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DUXBA0A1W2PPF3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DUXBA0A1W2PPF3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 KRT18P5-201ENST00000436075 1291 ntBASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms