Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AC006058.3-201ENST00000606217 1069 ntBASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV12-3A0A0B4J271 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 Z98044.1-201ENST00000632503 1764 ntBASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 AL031598.1-201ENST00000561511 1773 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TSPY23P-201ENST00000440136 739 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 AC124016.1-201ENST00000609552 612 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 AL512353.2-201ENST00000448759 1962 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 WIZP1-201ENST00000531444 2299 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms