Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV8-4A0A0B4J246 AP006587.1-201ENST00000534129 1502 ntBASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 YBX1P10-201ENST00000444752 975 ntBASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AC142086.2-201ENST00000569753 217 ntBASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 AL121829.2-201ENST00000620908 328 ntBASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV8-4A0A0B4J246 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AC139713.2-201ENST00000641328 2723 ntBASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AC090192.1-201ENST00000517740 490 ntBASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AC120498.8-201ENST00000614275 531 ntBASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TRAV8-4A0A0B4J246 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 AC099398.1-201ENST00000567919 2776 ntBASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRAV8-4A0A0B4J246 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms