Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 FLJ38576-201ENST00000623820 2459 ntBASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.56□□□□□ -0.4
TRBV20-1A0A075B6N2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 AL023806.1-201ENST00000603994 1649 ntBASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 PCDH8P1-201ENST00000428983 2773 ntBASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 AL662844.4-201ENST00000606367 2838 ntBASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRBV20-1A0A075B6N2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRBV20-1A0A075B6N2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
TRBV20-1A0A075B6N2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRBV20-1A0A075B6N2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms