Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 HCG4P8-203ENST00000443049 980 ntBASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CSNK1G3Q9Y6M4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 ATP5G2P1-201ENST00000433580 426 ntBASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 SPDYE13P-201ENST00000445314 798 ntBASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1G3Q9Y6M4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.39■□□□□ 0.54
CSNK1G3Q9Y6M4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.39■□□□□ 0.54
CSNK1G3Q9Y6M4 AC036111.1-201ENST00000533973 1582 ntBASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 AC024243.1-201ENST00000609234 778 ntBASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.53
CSNK1G3Q9Y6M4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.38■□□□□ 0.53
CSNK1G3Q9Y6M4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 AL645929.1-201ENST00000420084 975 ntBASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.37■□□□□ 0.53
CSNK1G3Q9Y6M4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms