Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.04■□□□□ 0.96
COL4A3BPQ9Y5P4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 AC006333.2-201ENST00000607957 2099 ntBASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL4A3BPQ9Y5P4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 AP003041.3-201ENST00000527151 707 ntBASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL4A3BPQ9Y5P4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
COL4A3BPQ9Y5P4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.02■□□□□ 0.95
COL4A3BPQ9Y5P4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL4A3BPQ9Y5P4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL4A3BPQ9Y5P4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms