Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 AL031598.1-201ENST00000561511 1773 ntBASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 Z98044.1-201ENST00000632503 1764 ntBASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 AL441883.1-201ENST00000566170 1045 ntBASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN16Q9Y5I7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 COX11P1-201ENST00000489116 835 ntBASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 YBX1P2-201ENST00000489612 999 ntBASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 AC011558.1-201ENST00000623459 338 ntBASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 AL023973.1-201ENST00000624619 620 ntBASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CLDN16Q9Y5I7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 HOXB1-202ENST00000577092 1414 ntBASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 KRT18P41-201ENST00000518924 1277 ntBASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 TNXA-203ENST00000507684 2038 ntBASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN16Q9Y5I7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN16Q9Y5I7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms